Plain language summary
How many topsoil samples should I take from under this tree? That was the question we asked in this study.
On farms, where we've been taking soil samples for decades, there are guidelines to tell us how many samples we should take, but we do not have that information for the soil under urban trees. It is important to sample, test, and improve urban forest soil because healthy soil is imperative to grow big, mature trees in our cities.
To answer our research question, we took nine topsoil samples (0–15 cm) from under five street trees and seven park trees in Cambridge, MA, USA. Each topsoil sample was tested for three soil properties: basal soil respiration (BSR; the change in CO2 concentration over 24 hours), electrical conductivity (EC; the salinity), and pH (the acidity or basicity). Each subset of nine topsoil samples was compared per soil property. The closer the soil property values, the fewer topsoil samples you need for the site; the farther apart the soil property values, the more topsoil samples you need to achieve a representative and robust sample of that soil property for that tree.
The findings were surprising. Street tree topsoil had approximately twice as much variation, requiring more intensive sampling, as did park tree topsoil, even though street trees had smaller soil sampling zones, constricted by tree pits. We concluded the article by discussing the use of cost-effective EC testing to first determine how spatially variable the soil is, before pursuing more expensive BSR testing. The research was limited by only being able to sample topsoil (0–15 cm) due to severe soil compaction; simultaneously a limitation and reminder of how important it is to monitor and care for our urban forest soils.
Introduction
The world’s population is moving to cities at a rate of three million people per week (UN-Habitat, 2009; UN DESA, 2015), an unprecedented era of urban growth. Urban development typically results in immediate losses of vegetation (Luck & Wu, 2002), after which, natural ecosystems are rapidly replaced by heterogeneous landscapes of impervious surfaces, buildings, and various types of green infrastructure. This process of urbanization is driving widespread loss of soil horizons, leaving only sparse patches of our planet’s “biologically active skin” strewn in between buildings and streets (Wall et al., 2010, p. 297), and subsequently, disrupting the basis for urban forest-based solutions (Herrmann et al., 2018).
The ecosystem services provided by urban forest-based solutions (e.g., biodiversity conservation, shading, carbon sequestration, and storage) will be constrained by the quality of urban soil. Urban soil quality has been poorly investigated due to the complexity of urban environments (e.g., soil cover, land-use history, pollution, degradation) (Ferreira et al., 2019). Yet, as local governments around the world choose to expand the quantity (and quality) of their urban canopies, the quality of this substrate will become increasingly pertinent (Levin et al., 2017; Pregitzer et al., 2016).
Since industrialization, understanding urban soil density, moisture, and structure have been critical to geotechnical and civil engineering to support built infrastructures such as subways, sanitary systems, and the foundations of buildings (Pincetl, 2010). Now, as more research demonstrates the importance of ecosystem services to the health and well-being of contemporary urban citizens, urban soils must be better understood, and their status more easily, rapidly assessed. There is a need to consider implications for ecosystem services derived from urban landscapes and to inform the transition to sustainable cities (Herrmann et al., 2018; Mitsch, 2012).
Soil health used interchangeably in this paper with soil quality, is defined as the capacity of soil to function as a vital living system within the ecosystem and land-use boundaries to sustain plant and animal productivity, maintain or enhance water and air quality, and promote plant and animal health (Doran & Zeiss, 2000; Jemison et al., 2019). In urban environments, anthropogenic influences (e.g., foot traffic, pollution, construction) have had such a ubiquitous and detrimental effect on soil health that they have given rise to an entirely new soil classification: anthrosol, from anthropogenic soil. The health of urban soils faces distinct challenges (Tresch et al., 2018), “as their evolution is controlled almost exclusively by humans, who impose very rapid transformation cycles compared with those occurring in less disturbed areas” (De Kimpe & Morel, 2000, p. 31). As such, mechanical mixing of soil by plows or bulldozers, compaction of soil by machinery or trampling feet, and other anthropogenic environmental conditions can cause highly disturbed and variable soil (Vasenev et al., 2013).
When soil properties in urban soils are frequently characterized by strong horizontal and vertical variability (Greinert, 2015; Pregitzer et al., 2016), the number of samples taken when conducting soil testing is critical for achieving representative results. Urban forestry practitioners and scientists must justify the number of soil samples taken to ensure the analysis is robust for policy making, and so research committees can ensure the study is scientifically sound. Spatial variation in topsoil testing is well-documented in the agricultural literature, and best practices for soil sampling design have emerged over the last century (Brinton et al., 2019; Morton et al., 2000; Parkin, 1993). However, due to strong soil property variability and spatial implications for testing, agricultural best practices do not apply to urban soils.
Soil variability characteristics in urban environments do not follow normal statistical distributions and most certainly not regular spatial distributions. Field variability can have a five -times greater influence on soil variability than laboratory issues (Brinton, 2020). Currently, the number of samples taken when testing soil health of urban forest-based solutions is based on feeling and intuition (De Kimpe & Morel, 2000). A specific approach is needed to study such deeply disturbed environments in order to overcome the problems related to soil variability and representative soil testing. The original contribution of this paper is a robust, statistically derived soil sampling method for urban forest topsoil to optimize the number of samples depending on the topsoil disturbance, which varies greatly from street trees (defined as trees growing along public streets) to park trees (defined as trees in public parks). The study offers urban foresters and soil ecologists specific recommendations on the optimal number of samples required for basal soil respiration (BSR), electrical conductivity (EC), and bulk density (BD), three of the most commonly measured soil properties, and critical to urban tree health with direct relations to microbial activity, (excess) salinity, and compaction, respectively.
Methods
Location, tree selection, and topsoil sampling
The soil study was carried out in Cambridge, Massachusetts, USA (Figure 1). The City of Cambridge Department of Public Works granted permission to sample the topsoil as required. Cambridge is a medium-sized city with 118,977 people, located in the state of Massachusetts and part of the Boston metropolitan area. The city’s history dates back to the beginning of the seventeenth century. Mining the Alewife Brook subwatershed for clays (to sustain Boston’s early brick industry), and the development that followed, caused extensive disturbance to Cambridge’s surface soils. Cut and fill activities left most of Cambridge with anthropogenically-influenced soils, which now lack properties of naturally developed soils, such as defined layers and horizons, permeability, and microbial activity (Cambridge Department of Public Works, 2008). These conditions act as a poor substrate for the city’s urban forestry and other greening initiatives.

Figure 1. The tree sampling sites were widely distributed throughout Cambridge, with a control sample from Boston, MA.
The majority (92%) of the sites were on urban soils, which are extensively influenced by human activities. Only the control sample had a unique soil type classification. This Soil Survey Geographic (SSURGO) database was produced by the U.S. Department of Agriculture (USDA), Natural Resources Conservation Service (NRCS), and cooperating agencies for the Soil Survey of Middlesex County, MA.
Genetically, all tree roots are capable of growing several meters in depth. However, most urban soils, which are typically compacted and have poor drainage, most often result in shallow rooted trees. Cambridge’s heavily anthropogenically-influenced soil have made shallow rooted trees the rule, rather than the exception. Therefore, soil samples were taken to a depth of 15 cm. At most sites, the soil we had access to was so compacted it prevented the corer from deeper sampling.
That being said, in agriculture, a 0–15 cm soil sampling depth is normally sufficient, but there is limited literature on urban forest soil sampling. In some similar studies, like Moriyama & Numata (2015), when investigating cicada diversity loss, the authors sampled severely compacted urban soil to a maximum depth of only 5 cm, affirming shallow sampling for surface soil compaction. In another citywide analysis of 136 urban sites, sampling was limited to 14 cm, also due to severe compaction (Edmondson et al., 2011). Since total rooting depth is unknown, the topsoil was severely compacted, and previous literature to support a shallow soil sampling depth, the decision was made to sample 0–15 cm, or the “topsoil”.
A total of 117 soil samples were collected to sample the topsoil of thirteen red maples (Acer rubrum), including five street trees, seven park trees, and one reference sample from Boston’s Arnold Arboretum (Section D, Figure 1). The reference, an unmodified topsoil, was collected from a “no-mow area” within Peter’s Hill at the arboretum. The reference sample was identified on SSURGO (Soil Survey Geographic Database) as a coarse-loamy, mixed, mesic Newport silt loam, Typic Dystrochrept, soil order Inceptisol. For all other soils, the man-made nature of the sites suggested they be loosely classified as, “soils with strong human influence”, including Anthrosols (i.e., soils exposed to continuous and intensive agriculture) and Technosols (i.e., soils impacted by industrial interventions), of unknown origin (International Union of Soil Sciences Working Group, 2015, p. 10). The USDA Soil Taxonomy (2010) refers to these anthropogenic soils as Udorthents and (one of) its suborders: Merrimac urban land complex.
The red maple was chosen because maples dominate Cambridge’s landscape, as they do other North American urban landscapes, growing as far south as Florida and as far north as Quebec (Canada). Its geographical spread offers ideal preconditions for this study’s replicability. While it prefers wet conditions (and even tolerates standing water) and acidic soils, the red maple is highly adaptable to less-than-ideal conditions, making it a true survivor, especially in the urban context.
Nine samples were taken from each of the 13 sites for a total of 117 topsoil samples. Topsoils were sampled from October 14–21, 2019, with a 15 cm long Ames hand bulb planter (10 cm wide) to a depth of 15 cm. A more sophisticated soil corer was also attempted (brand name: JMC “Backsaver Handle”) but at most sites, soil contained obstructions such as roots and infrastructure that prevented the corer from sampling deeper than 15 cm. The bulb planter also gave sufficient volume per sample, which minimized time spent and disturbance to already vulnerable topsoil. The weather conditions on all sampling days varied from sunny to partly cloudy, with temperatures ranging from 12 to 18°C. No samples were taken within a 48-hour period of a precipitation event to ensure proper soil moisture range (Brinton, 2019; Salter & Williams, 1965). It had rained for two days 72 hours prior to the first sampling date. It did not rain between the sampling dates (October 14–21, 2019).
Surface vegetation, debris, and humus were removed with a trowel. Within each tree’s dripline (i.e., the outermost circumference of the tree's canopy), the soil was divided into nine equal zones (Figure 2: A-1; A-2; A-3; B-1; B-2; B-3; C-1; C-2; C-3). For street trees, these zones became smaller, as there was a limited soil access area. Each zone, and each topsoil core within each zone, was selected at random for each individual tree sampled (Figure 2). It was not possible to note the GPS-coordinates of each topsoil core, as the area was too small and the GPS-variability too high. The GPS-coordinates for each tree sampled were recorded at the trunk.

Figure 2. Sampling design within the tree’s dripline, divided into nine equal parts.
The hypothesis is that any three of these zones will accurately represent the soil under the tree.
Then, one 15 cm topsoil sample was taken within each zone and collected into labelled, sealable plastic bags. The samples were rapidly transported back to the testing location to prevent sun exposure. New England autumn temperatures (12 to 18°C) helped keep soils cool.
Topsoil testing and analytical methods
The standard operating protocol for the Solvita Field Test was followed (Brinton, 2018) to measure SBR. Samples were sieved through a 6 mm sieve to remove roots, leaf litter, and/or gravel. A digital scale (0.1 g readability) was used to weigh 90-gram topsoil samples, which were labelled, and placed into polystyrene incubation jars (475 ml) with gas-tight gasket lids. The topsoils were tested on an as-is moisture basis. One low-level CO2 gel probe was added. Samples were placed in a dark room at room temperature (22°C). CO2 gel probes were read after 24 hours and recorded with the Solvita Multi-Mode Digital Color Reader using ALT mode for BSR. Method variance testing was conducted as a QA/QC procedure with standard colour chips to ensure the Solvita Field Test was a reliable method for quantifying SBR.
EC was measured on a 1:1 soil:deionized (DI) water ratio by vortex-spinning for 10 seconds and then standing for 30 minutes before insertion of a flow-through EC probe with a cell constant of 10cm-1 calibrated against a commercial KCl standard. Results were read to the nearest 0.01 dS/m-1. BD was measured as g cc-1 by placing dry, 2 mm sieved topsoil levelled in a standard, certified 30 cc scoop, and weighing to the nearest 0.1 gram.
The Snedecor & Cochran (1980) statistical methods were used to determine the required number of samples to achieve the desired certainty result. Two confidence intervals (CI) of 90% and 80% with an allowable error rate (ER) of 10% and 20% of the sample mean, were selected. The following formula by Brinton et al. (2019) was used:
Where n = sample size required
z = z score associated with the degree of confidence
s = sample standard deviation
E = allowable error, or half the width of the CI
For each tree sampled, the required number of samples to achieve 90% CI - 10% ER, 80% CI - 10% ER, 90% CI - 20% ER, and 80% CI - 20% ER was plotted for BSR, EC, and BD. All statistical analyses were conducted using Minitab statistical software (State College PA). In the paper, selected statistical figures and correlations are shown.
Results
All soil properties within the 0–15 cm depth interval for the 117 topsoils sampled are presented in the Underlying data (Galle et al., 2021). The number of samples required at 90% CI - 10% ER and 80% CI - 20% ER for BSR, EC, and BD for both park and street trees are presented below. The number of samples required at the other CIs and ERs, 80% CI - 10% ER, and 90% CI - 20% ER, can be found in the Underlying data (Galle et al., 2021).
Site characteristics
SBR (mg/kg CO2-C) varied widely from site to site, and within sites. Values as low as 7.4 ± 2.256 mg/kg CO2-C (mean ±1 SE) were observed at AR8 (park), and values as high as 138 ± 2.256 mg/kg CO2-C at AR10 (street). Three samples (AR7-B2; AR10-A3; AR11-C1) were removed as outliers because they were ≥125 mg/kg CO2-C, which is considered excessively high, according to the Solvita Field Test interpretation key. AR7 was a park tree, AR10 and AR11 were street trees. Electrical conductivity varied somewhat but not significantly less. The lowest value was 0.08 ± 0.04 dS/m2 at AR8 (park) and the highest was 2.34 ± 0.04 dS/m2 at AR2 (street). Bulk density (g/cc) varied less. The lowest value was 13.6 ± 0.5 g/cc at AR11 (street) and the highest was 43.1 ± 0.5 g/cc AR3 (street).
Number of samples required
For each topsoil property measured, the number of samples required at given CIs and ERs varied greatly. BSR showed the most variation with 44.4 samples required at 90% CI - 10% ER and 6.8 samples required at 80% CI - 20% ER. On average, street trees required nearly twice (± 1.76) as many samples as park trees, despite being constricted by tree pits and having much smaller soil sampling zones. This was true across all CIs (Table 1 and Table 2).
Table 1. Mean number of samples required at a 90% and 80% confidence interval (CI) and 10% and 20% error rate (ER; % of mean) for basal soil replication (BSR) for park trees.
| | | | Basal Soil Respiration |
|---|
| | | | Samples required at given CI and ER |
|---|
| | | | 90% CI - 10% ER | 80% CI - 20% ER |
|---|
| Location | Sub group | BSR (mg/kg) | SD | Per sub group | Average per site | Per sub group | Average per site |
|---|
| C - park | A | 37.6 | 4.86 | 4.5 | 2.7 | 0.7 | 0.4 |
| B | 34.1 | 3.15 | 2.3 | 0.3 |
| C | 31.2 | 2.08 | 1.2 | 0.2 |
| AR1 - park | A | 49.3 | 13.98 | 22 | 22 | 3.3 | 3.3 |
| B | 42.2 | 5.45 | 4.5 | 0.7 |
| C | 39.5 | 15.14 | 39 | 6.0 |
| AR4 - park | A | 32.3 | 2.21 | 1.3 | 4.1 | 0.2 | 0.6 |
| B | 29.2 | 4.73 | 7.0 | 1.1 |
| C | 28.0 | 3.39 | 3.9 | 0.6 |
| AR5 - park | A | 13.4 | 2.50 | 9.3 | 32 | 1.4 | 4.8 |
| B | 33.3 | 17.77 | 77 | 12 |
| C | 15.1 | 2.71 | 8.6 | 1.3 |
| AR6 - park | A | 20.9 | 10.15 | 63 | 57 | 9.7 | 8.6 |
| B | 16.7 | 4.35 | 18 | 2.8 |
| C | 16.3 | 9.32 | 88 | 13 |
| AR7 - park | A | 45.4 | 12.92 | 22 | 31 | 3.3 | 4.7 |
| B | 33.1 | 5.87 | 8.5 | 1.3 |
| C | 26.7 | 12.95 | 63 | 9.6 |
| AR8 - park | A | 16.3 | 8.30 | 70 | 52 | 11 | 8.0 |
| B | 17.6 | 8.89 | 69 | 10 |
| C | 22.7 | 5.85 | 18 | 2.7 |
| AR9 - park | A | 72.9 | 24.04 | 29 | 74 | 4.5 | 11 |
| B | 18.4 | 2.62 | 5.4 | 0.8 |
| C | 56.5 | 47.27 | 188 | 29 |
Table 2. Mean number of samples required at a 90% and 80% confidence interval (CI) and 10% and 20% error rate (ER; % of mean) for basal soil replication (BSR) for street trees.
| | | | Basal Soil Respiration |
|---|
| | | | Samples required at given CI and ER |
|---|
| | | | 90% CI - 10% ER | 80% CI - 20% ER |
|---|
| Location | Sub group | BSR (mg/kg) | SD | Per sub group | Average per site | Per sub group | Average per site |
|---|
| AR2 - street | A | 28.9 | 4.83 | 7.5 | 16 | 1.1 | 2.5 |
| B | 27.3 | 6.42 | 15 | 2.3 |
| C | 37.9 | 12.00 | 27 | 4.1 |
| AR3 - street | A | 48.8 | 46.92 | 248 | 207 | 38 | 32 |
| B | 46.8 | 46.00 | 260 | 40 |
| C | 37.3 | 24.11 | 113 | 17 |
| AR10 - street | A | 21.0 | 5.30 | 17 | 41 | 2.6 | 6.2 |
| B | 38.6 | 2.70 | 1.3 | 0.2 |
| C | 25.8 | 15.97 | 103 | 16 |
| AR11 - street | A | 38.8 | 12.08 | 26 | 11 | 4.0 | 1.7 |
| B | 33.0 | 1.15 | 0.3 | 0.1 |
| C | 33.6 | 5.16 | 6.4 | 1.0 |
| AR12 - street | A | 14.0 | 2.37 | 7.7 | 27 | 1.2 | 4.2 |
| B | 18.6 | 4.91 | 19 | 2.9 |
| C | 19.7 | 8.96 | 56 | 8.5 |
EC had very similar results to BSR, with 41.7 samples required at 90% CI - 10% ER and 6.4 samples required at 80% CI - 20% ER. Like BSR, street trees also required nearly twice (± 1.65) as many samples as park trees (Table 3 and Table 4).
Table 3. Mean number of samples required at a 90% and 80% confidence interval (CI) and 10% and 20% error rate (ER; % of mean) for electrical conductivity (EC) for park trees.
| | | | Electrical Conductivity |
|---|
| | | | Samples required at given CI and ER |
|---|
| | | | 90% CI - 10% ER | 80% CI - 20% ER |
|---|
| Location | Sub group | EC (dS/m2) | SD | Per sub group | Average per site | Per sub group | Average per site |
|---|
| C - park | A | 0.32 | 0.21 | 114 | 41 | 17 | 6.2 |
| B | 0.25 | 0.04 | 6.3 | 1.0 |
| C | 0.17 | 0.02 | 2.1 | 0.3 |
| AR4 - park | A | 0.47 | 0.10 | 12 | 20 | 1.8 | 3.1 |
| B | 0.48 | 0.07 | 5.7 | 0.9 |
| C | 0.68 | 0.27 | 43 | 6.5 |
| AR5 - park | A | 0.39 | 0.22 | 84 | 34 | 13 | 5.2 |
| B | 0.69 | 0.17 | 16 | 2.4 |
| C | 0.24 | 0.02 | 2.1 | 0.3 |
| AR6 - park | A | 0.34 | 0.08 | 16 | 27 | 2.5 | 4.0 |
| B | 0.29 | 0.10 | 30 | 4.5 |
| C | 0.26 | 0.09 | 33 | 5.1 |
| AR7 - park | A | 0.27 | 0.16 | 95 | 37 | 14 | 5.7 |
| B | 0.23 | 0.05 | 14 | 2.2 |
| C | 0.18 | 0.02 | 3.3 | 0.5 |
| AR8 - park | A | 0.10 | 0.02 | 8.1 | 19 | 1.2 | 2.9 |
| B | 0.13 | 0.05 | 34 | 5.1 |
| C | 0.13 | 0.03 | 16 | 2.4 |
| AR9 - park | A | 0.36 | 0.15 | 46 | 52 | 7.0 | 7.9 |
| B | 0.29 | 0.17 | 91 | 14 |
| C | 0.32 | 0.09 | 19 | 2.8 |
Table 4. Mean number of samples required at a 90% and 80% confidence interval (CI) and 10% and 20% error rate (ER; % of mean) for electrical conductivity (EC) for street trees.
| | | | Electrical Conductivity |
|---|
| | | | Samples required at given CI and ER |
|---|
| | | | 90% CI - 10% ER | 80% CI - 20% ER |
|---|
| Location | Sub group | EC (dS/m2) | SD | Per sub group | Average per site | Per sub group | Average per site |
|---|
| AR2 - street | A | 0.65 | 0.14 | 12 | 75 | 1.8 | 11.5 |
| B | 1.20 | 1.00 | 186 | 28 |
| C | 0.61 | 0.20 | 28 | 4.3 |
| AR3 - street | A | 0.71 | 0.61 | 198 | 98 | 30 | 15 |
| B | 0.96 | 0.51 | 77 | 12 |
| C | 1.32 | 0.34 | 18 | 2.7 |
| AR10 - street | A | 1.20 | 0.75 | 105 | 68 | 16 | 10.3 |
| B | 1.00 | 0.16 | 7.3 | 1.1 |
| C | 0.98 | 0.75 | 92 | 14 |
| AR11 - street | A | 0.28 | 0.05 | 7.1 | 7 | 1.1 | 1.0 |
| B | 0.29 | 0.04 | 5.3 | 0.8 |
| C | 0.22 | 0.04 | 7.1 | 1.1 |
| AR12 - street | A | 0.15 | 0.05 | 28 | 23 | 4.2 | 3.6 |
| B | 0.17 | 0.05 | 23 | 3.5 |
| C | 0.15 | 0.04 | 19 | 2.9 |
The number of samples required for BD was drastically less than BSR and EC, with 2.4 samples required at 90% CI - 10% ER and 0.4 samples required at 80% CI - 20% ER. Significant spatial variation in street trees compared to park trees was concluded; street trees required nearly five times (± 4.89) as many samples as park trees (Table 5 and Table 6).
Table 5. Mean number of samples required at a 90% and 80% confidence interval (CI) and 10% and 20% error rate (ER; % of mean) for bulk density (BD) for park trees.
| | | | Bulk Density | | |
|---|
| | | | Samples required at given CI and ER |
|---|
| | | | 90% CI - 10% ER | 80% CI - 20% ER |
|---|
| Location | Sub group | BD (g/cc) | SD | Per sub group | Average per site | Per sub group | Average per site |
|---|
| C - park | A | 0.91 | 0.03 | 0.2 | 0.4 | 0.0 | 0.1 |
| B | 0.86 | 0.02 | 0.2 | 0.0 |
| C | 0.92 | 0.05 | 0.9 | 0.1 |
| AR4 - park | A | 0.98 | 0.04 | 0.5 | 0.4 | 0.1 | 0.1 |
| B | 0.95 | 0.03 | 0.2 | 0.0 |
| C | 1.03 | 0.04 | 0.4 | 0.1 |
| AR5 - park | A | 1.01 | 0.04 | 0.4 | 1.6 | 0.1 | 0.2 |
| B | 1.01 | 0.12 | 3.6 | 0.6 |
| C | 1.17 | 0.06 | 0.6 | 0.1 |
| AR6 - park | A | 1.07 | 0.10 | 2.6 | 1.2 | 0.4 | 0.2 |
| B | 1.00 | 0.05 | 0.6 | 0.1 |
| C | 1.03 | 0.04 | 0.5 | 0.1 |
| AR7 - park | A | 0.96 | 0.03 | 0.4 | 0.4 | 0.1 | 0.1 |
| B | 0.97 | 0.05 | 0.6 | 0.1 |
| C | 1.03 | 0.02 | 0.1 | 0.0 |
| AR8 - park | A | 1.19 | 0.07 | 1.0 | 1.1 | 0.2 | 0.2 |
| B | 1.12 | 0.10 | 2.1 | 0.3 |
| C | 1.18 | 0.03 | 0.2 | 0.0 |
| AR9 - park | A | 1.05 | 0.10 | 2.6 | 2.0 | 0.4 | 0.2 |
| B | 1.21 | 0.03 | 2.1 | 0.0 |
| C | 1.02 | 0.07 | 1.4 | 0.2 |
Table 6. Mean number of samples required at a 90% and 80% confidence interval (CI) and 10% and 20% error rate (ER; % of mean) for bulk density (BD) for street trees.
| | | | Bulk Density |
|---|
| | | | Samples required at given CI and ER |
|---|
| | | | 90% CI - 10% ER | 80% CI - 20% ER |
|---|
| Location | Sub group | BD (g/cc) | SD | Per sub group | Average per site | Per sub group | Average per site |
|---|
| AR2 - street | A | 1.18 | 0.10 | 2.1 | 2 | 0.3 | 0.3 |
| B | 1.13 | 0.12 | 3.1 | 0.5 |
| C | 1.23 | 0.02 | 0.1 | 0.0 |
| AR3 - street | A | 1.30 | 0.06 | 0.7 | 3 | 0.1 | 1 |
| B | 1.21 | 0.17 | 5.5 | 0.8 |
| C | 1.28 | 0.15 | 3.8 | 0.6 |
| AR10 - street | A | 0.97 | 0.13 | 4.7 | 4 | 0.7 | 0.6 |
| B | 0.87 | 0.10 | 3.8 | 0.6 |
| C | 1.15 | 0.13 | 3.3 | 0.5 |
| AR11 - street | A | 0.70 | 0.06 | 2.1 | 13 | 0.3 | 1.9 |
| B | 0.53 | 0.06 | 4.0 | 0.6 |
| C | 0.69 | 0.24 | 32 | 4.9 |
| AR12 - street | A | 1.14 | 0.05 | 0.5 | 1 | 0.1 | 0.1 |
| B | 1.11 | 0.05 | 0.6 | 0.1 |
| C | 1.12 | 0.08 | 1.3 | 0.2 |
The number of samples required at the other CIs and ERs, 80% CI - 10% ER and 90% CI - 20% ER, can be found in the Underlying data (Galle et al., 2021).
Non-normal data
Spatial variation across BSR, EC, and BD did not follow normal distribution patterns and most certainly not regular spatial distributions. For correlating basal respiration to EC outlier separations were first used to better identify the spatial groupings and then Box-Cox transformation applied to all samples together. To correlate BSR with BD a Johnson transformation was required for BD to be used successfully.
BSR versus BD showed a typical grouping. Outliers were separated, which revealed predictable distribution. There appears to be a relationship of BD to the BSR rate (Figure 3). This may mean lower BD topsoil have stronger respiration, likely due to increased organic matter causing lower densities. The BSR outlier topsoil appears to be separate populations and all correlations are significant. If normalized data is used (Box-Cox and Johnson) and all samples for the park and street trees are regressed together, a similar conclusion of BD influencing BSR rate is reached and is statistically highly significant (p < 0.001).

Figure 3.
(a) Basal soil replication (BSR) of park trees as affected by bulk density (BD) of the regular group (R2 = 0.3826) versus high respiration outlier group (R2 = 0.9731) and (b) BSR of street trees as affected by BD of the regular group (R2 = 0.8124) versus high respiration outlier group (R2 = 0.9882). The apparent relationship indicates that stronger respiration is due to increased organic matter associated with lower BD soils.
The relationship between EC to BSR was also examined (Figure 4). Using the original data, no correlation was observable. However, when applying Box-Cox transformed BSR and Johnson transformed EC, a very significant correlation was obtained, although the R2 was low. Therefore, there is some reason to believe a secondary factor influencing BSR is the presence of dissolved salts, an indirect indicator of nutrient fertility.

Figure 4. Relationship of electrical conductivity (EC) to basal soil replication (BSR) after normalization.
No correlation was observed in the data before normalization. BSR was Box-Cox transformed and EC was Johnson transformed.
Discussion and further research avenues
Little work has explored the number of samples required for soil testing in urban forest topsoil. One similar study (Cohen et al., 2008) found that, for soil pH, three samples are needed, while more (n = 11–33) are needed for soil organic matter (SOM) and total phosphorus (TP). Cohen et al. (2008) assumed a 10% allowable error (% of mean), indicating that results are of similar statistical allowance. The Snedecor & Cochran (1980) statistical techniques shown in Cohen et al. (2008) mirrored that of this study (p. 419). Another study (Conant & Paustian, 2002) also showed similar spatial variability estimates with comparable techniques (p. 131), but then detected changes in soil C in grasslands. So far, the only publication using this particular spatial variability model for BSR, EC, and BD was Brinton et al. (2019), which inspired this study.
Some of the very large variability observed in the BSR data may have been caused by the hydrophobic topsoil properties. Previous work found that urban forest topsoil was characterized by a significant accumulation of high molecular weight Polycyclic Aromatic Hydrocarbons (PAHs) of industrial and vehicular origin, likely due to urban industry and traffic. A semi-quantitative test of hydrophobicity was used and is the relative speed of wetting after the addition of water to dry soil. A soil that wets within 1 minute of water addition (9 cc added to 30 cc soil) would be considered normal; a soil that requires 10 minutes to wet is restricted, and a soil requiring 24 hours is considered extremely hydrophobic.
This paper’s results corroborate the findings of Blume (1986) and Craul & Klein (1980) that urban topsoil typically show great variability horizontally across the landscape. Craul (1991) concurs that this is, “primarily due to the cut and fill, backfilling, and resurfacing that occur during the process of land shaping” (p. 25). Results show more topsoil disturbance (e.g., in street trees) would cause a greater spatial variance, and therefore require more samples to gain an accurate and representative estimation of the topsoil’s properties. However, the association between smaller soil sampling zones and reduced spatial variance was disproven. Results suggest spatial variance increases as the soil sampling zone size decreases (e.g., tree pit). However, size is most likely not the only contributing factor. Sites with small soil sampling zones are highly likely to be street tree sites, which mostly have poorer quality topsoil. Findings from similar studies indicate that urban soils, especially underneath street trees, are highly compacted (Craul, 1991). While tree roots are highly opportunistic and will grow wherever the environment is satisfactory, compaction will jeopardize that growth. Foot traffic, construction, and vehicles close pore space, reduce aeration and restrict absorption of water and oxygen (Day & Bassuk, 1994). Ultimately, roots will not be able to penetrate the soil and the tree’s growth will be stunted.
This study was focused on limited parameters. It tested (and ultimately advised) a topsoil sampling design based initially on BSR and then compared to EC and BD. These topsoil properties were chosen because they are three of the most commonly measured topsoil properties, and critical to urban tree health with direct relations to microbial activity, (excess) salinity, and compaction, respectively. In general, these properties are also indicative of overall topsoil health, methodically consistent, easy-to-measure, and had little between-sample method variance. Observing EC at the same locations as BSR expressed similar variation (r2 = 0.4207 p < 0.05) and was not statistically different from variation in BSR (Figure 5). Therefore, controlling for at least one source of variability is likely to improve sampling design for all other types of analysis. Future research should explore this.

Figure 5. Electrical conductivity (EC) may be a suitable proxy for basal soil replication (BSR) variability with significant R2 and no difference by Student’s T-Test (p < 0.05).
Critical concerns remain over the cost-effectiveness of statistically robust sampling. The choice of sampling strategy may lie in its financial implications. This paper shows that several samples (or sensors) are required to achieve an accurate and representative estimation of topsoil properties in highly disturbed and variable urban environments. The choice of acceptable strategy may be dependent on considering the test cost due to the large number of samples indicated at any level of certainty. A sampling at 90% CI - 10% ER would appear unrealistic, and financially infeasible. We suggest accepting a 20% ER at either 90% or 80% CI for optimal sampling that still achieves accuracy but lessens costs.
In addition, before embarking on costly biological testing (like BSR), we propose using cheaper EC testing as a proxy to test for topsoil spatial variation. Figure 5 shows significant comparisons between the required number of samples for EC and BSR. This was true across all CIs. Also, when normalizing data for both EC and BSR (Figure 4), a significant correlation was found, which could indicate a strong relationship between changes in EC and biological response, respectively.
Another limitation was the severe root-sidewalk conflicts faced in the field. Initially, some 100 sampling locations were pre-selected based on the City of Cambridge tree inventory. However, nearly 70% of the street trees initially chosen were unable to be sampled due to insufficient soil volumes in the unrestricted area around the tree. It is likely that these trees, despite being alive, are in poor health due to a lack of growing matrix. To understand the spatial variance of these soils under severe "anthropedogenesis" (Effland & Pouyat, 1997), also known as the role of human activity in soil formation, deep, continuous mechanical operations would be required to access the soil. We do not know if this kind of more intensive sampling would cause the tree more harm than good, but further studies should take the spatial variance of these inaccessible soils into account to also measure vertical variability.
This study only analyzed horizontal variability due to severe topsoil compaction uncovered across all sites, which hindered sampling deeper than 15 cm. Since only highly intrusive mechanical sampling could access deeper soils, involving possible and unknown damage to the trees, it was not possible to map vertical variation. There is, however, a reason to believe vertical soil profiles are more heterogeneous than we think. Herrmann et al. (2018) compared urban to reference pre-urban soil profiles from 11 different cities, which revealed how urbanization modifies the presence and order of soil layers and its properties. They found urban soils had fewer horizons than their pre-urban counterparts, and often missed intermediate B horizons, which are critical to certain ecosystem functions. Future research should examine the role of widespread loss of intermediate soil horizons on vertical variation in soil properties, and ultimately, its impact on urban tree health.
Studies continue to show urban soils are becoming increasingly heterogeneous (Effland & Pouyat, 1997; Hope et al., 2005; Pouyat & McDonnell, 1991). However, urbanization processes (e.g., cut and fill, backfilling) are increasingly similar worldwide, which may support a generalized understanding of the nature of urban topsoil on a global scale. While future research should also consider the applicability of this study’s results to other cities, we may be approaching an era where urban soils are increasingly homogeneous. The ‘next generation’ soil sampling design and common metrics proposed in this study could indeed be widely employed.
Conclusions
An increased interest in topsoil quality as it relates to urban tree health and growth raises important challenges in how measurements are to be made in documenting topsoil health. In this study, horizontal spatial variation of topsoil quality traits including a biological indicator (BSR), EC, and BD was measured using 117 topsoil samples across 13 tree sites to recommend an urban forest topsoil sampling design for practitioners. The results underscore the challenge to obtain a robust, statistically derived topsoil sampling method to accommodate the observed topsoil-based variability associated with the urban forest. Among key findings, the study revealed that topsoil underneath street trees had twice as much variation as did topsoil under park trees, although street trees were constricted by tree pits and had much smaller soil sampling zones.
Human-induced activities such as construction and landscaping clearly increase potential variability in an urban measurement environment, and additionally at the street-level, depositions including litter and vehicular hydrocarbon output result in increased perturbations affecting test results. In the urban environment, trees must survive severe root-sidewalk conflicts, and these translate to various impediments for topsoil sampling. These factors taken as a whole suggest that before any conclusions on tree health as affected by topsoil quality can be made, a statistically validated sampling regimen should be derived that constrains sample variability to acceptable limits. These data suggest a number of directions that urban foresters, scientists, and practitioners should explore in topsoil sampling as a means to gain a better understanding of tree health.
Urban soil science is an emerging field of interest. Urban environments are increasingly becoming humans’ dominant ecosystem, as approximately three million people move to cities every week. Growing urban biomes bring about a unique set of challenges for keeping cities clean, comfortable, and healthy places to live. Healthy soil, with ample microbes, underlies the urban forest-based solutions to several of those challenges, yet is fast becoming a limited commodity in cities. Geotechnical and civil engineers analyze soil as a substrate for laying the foundation of the “built environment”. If, however, the lens of ecological engineering is applied, it may influence decisions about sustainable ecosystems that integrate human society with its environment. While soil is intrinsically linked with anthropogenic activities in cities, it is also essential for the functioning of urban ecosystems. Transitioning to urban forest-based cities will potentially require that ecological engineers and related professionals consider the implications of proper topsoil sampling methodology to characterize a soil’s ecosystem services in the cities of tomorrow.
Acknowledgements
We wish to thank Senseable City Laboratory at the Massachusetts Institute of Technology for hosting Nadina Galle and the Netherlands Fulbright Association for the financial assistance to make this research possible. This research could not have been completed without the generous support of Caroline Jaffe (MIT Media Lab) for her help in soil sampling and processing, Sophie Nitoslawski (University of British Columbia) for her enthusiastic encouragement and always useful critiques, and Greg Austic (Our-Sci LLC) for his constructive feedback. Special thanks to the City of Cambridge and the City of Boston for enabling this research, and the technicians at Woods End Laboratories for assisting in the soil testing.
Faculty Opinions recommendedReferences
- Blume HP:
Characteristics of urban soils.
Int. Scientific Worksh. on Soils and Soil Zoology in Urban Ecosyst. as a Basis for Manage. and Use of Green/Open Spaces, Berlin,
1986; 15–19.
- Brinton W:
Solvita Instructions: Natural Soil Respiration. SOP Version 2019: 2.1. Woods End Laboratories Inc. Manuscript, 2018. Reference Source
- Brinton W:
Soil CO2 Respiration: Official Solvita Instructions (Solvita Field Test). Woods End Laboratories, Maine. 2019. Reference Source
- Brinton WF:
Laboratory Soil Handling Affects CO2 Respiration, Amino-N and Water Stable Aggregate Results.
Agri Res & Tech Open Access J.
2020; 24(2): 556262. Publisher Full Text
- Brinton WF, Guillard K, Morris TF, et al.:
How do soil health tests vary compared to chemical nutrient tests on New England dairy farms?
SSSA International Soils Meeting, January 2019, San Diego, poster.
2019; Accessed on October 18, 2019. Reference Source
- Cambridge Department of Public Works:
Wastewater and Stormwater Management Guidance. Wastewater and Stormwater Management Guidance, 2008. Reference Source
- Cohen MJ, Dunne EJ, Bruland GL:
Spatial variability of soil properties in cypress domes surrounded by different land uses.
Wetlands.
2008; 28(2): 411–422. Publisher Full Text
- Conant RT, Paustian KJEP:
Spatial variability of soil organic carbon in grasslands: implications for detecting change at different scales.
Environ Pollut.
2002; 116 Suppl 1: S127–S135. PubMed Abstract
| Publisher Full Text
- Craul PJ:
Urban soil: problems and promise.
Arnoldia.
1991; 51(1): 23–32. Reference Source
- Craul PJ, Klein CJ:
Characterization of streetside soils of Syracuse, New York.
Metro Tree Impr Alliance (METRIA) Proc.
1980; 3: 88–101. Reference Source
- Day SD, Bassuk NL:
A review of the effects of soil compaction and amelioration treatments on landscape trees.
J Arboric.
1994; 20(1): 9–17. Reference Source
- De Kimpe CR, Morel JL:
Urban soil management: a growing concern.
Soil Sci.
2000; 165(1): 31–40. Publisher Full Text
- Doran JW, Zeiss MR:
Soil health and sustainability: managing the biotic component of soil quality.
Appl Soil Ecol.
2000; 15(1): 3–11. Publisher Full Text
- Edmondson JL, Davies ZG, McCormack SA, et al.:
Are soils in urban ecosystems compacted? A citywide analysis.
Biol Lett.
2011; 7(5): 771–774. PubMed Abstract
| Publisher Full Text
| Free Full Text
- Effland WR, Pouyat RV:
The genesis, classification, and mapping of soils in urban areas.
Urban Ecosyst.
1997; 1(4): 217–228. Publisher Full Text
- Ferreira CSS, Kalantari Z, Salvati L, et al.:
Urban Areas. In P. Pereira (Ed.), Soil Degradation, Restoration and Management in a Global Change Context.2019; 4(6): 207–249. Publisher Full Text
- Galle N, Brinton W, Vos R, et al.:
Mean number of samples needed at a 90% and 80% CI and 10% and 20% ER (% of mean) for BSR, EC, and BD for park trees and street trees. [Data set].
Zenodo.
2021. http://www.doi.org/10.5281/zenodo.4687540
- Greinert A:
The heterogeneity of urban soils in the light of their properties.
J Soils Sediments.
2015; 15(8): 1725–1737. Publisher Full Text
- Herrmann DL, Schifman LA, Shuster WD:
Widespread loss of intermediate soil horizons in urban landscapes.
Proc Natl Acad Sci U S A.
2018; 115(26): 6751–6755. PubMed Abstract
| Publisher Full Text
| Free Full Text
- Hope D, Zhu W, Gries C, et al.:
Spatial variation in soil inorganic nitrogen across an arid urban ecosystem.
Urban Ecosyst.
2005; 8(3–4): 251–273. Publisher Full Text
- International Union of Soil Sciences (IUSS) Working Group Wrb:
The world reference base for soil resources 2014, update 2015: International soil classification system for naming soils and creating legends for soil maps.
World Soil Resources Reports No. 106.
2015; 192. Reference Source
- Jemison JM, Kersbergen R, Majewski C, et al.:
Soil Health of Recently Converted No-till Corn Fields in Maine.
Communications in Soil Science and Plant Analysis.
2019; 50(19): 2384–2396. Publisher Full Text
- Levin MJ, Kim KHJ, Morel JL, et al.:
Soils within cities.
2017. Reference Source
- Luck M, Wu J:
A gradient analysis of urban landscape pattern: a case study from the Phoenix metropolitan region, Arizona, USA.
Landscape Ecol.
2002; 17(4): 327–339. Publisher Full Text
- Mitsch WJ:
What is ecological engineering?
Ecol Eng.
2012; 45: 5–12. Publisher Full Text
- Moriyama M, Numata H:
Urban soil compaction reduces cicada diversity.
Zoological Lett.
2015; 1(1): 19. PubMed Abstract
| Publisher Full Text
| Free Full Text
- Morton JD, Baird DB, Manning MJ:
A soil sampling protocol to minimise the spatial variability in soil test values in New Zealand hill country.
New Zealand Journal of Agricultural Research.
2000; 43(3): 367–375. Publisher Full Text
- Parkin TB:
Spatial variability of microbial processes in soil—a review.
J Environ Qual.
1993; 22(3): 409–417. Publisher Full Text
- Pincetl S:
From the sanitary city to the sustainable city: challenges to institutionalising biogenic (nature's services) infrastructure.
Local Environment.
2010; 15(1): 43–58. Publisher Full Text
- Pouyat RV, McDonnell MJ:
Heavy metal accumulations in forest soils along an urban- rural gradient in southeastern New York, USA.
Water, Air and Soil Pollution.
1991; 57(1): 797–807. Publisher Full Text
- Pregitzer CC, Sonti NF, Hallett RA:
Variability in urban soils influences the health and growth of native tree seedlings.
Ecol Restor.
2016; 34(2): 106–116. Publisher Full Text
- Salter PJ, Williams JB:
The influence of texture on the moisture characteristics of soils: a critical comparison of techniques for determining the available-water capacity and moisture characteristic curve of a soil.
J Soil Sci.
1965; 16(1): 1–15. Publisher Full Text
- Snedecor GW, Cochran WG:
Statistical Methods. Iowa State University Press, Ames. Statistical methods. 7th ed.. The Iowa State University Press, Ames.
1980. Reference Source
- Tresch S, Moretti M, Le Bayon RC, et al.:
Urban soil quality assessment—a comprehensive case study dataset of urban garden soils.
Front Environ Sci.
2018; 6: 136. Publisher Full Text
- USDA:
Keys to soil taxonomy. Soil Survey Staff, Washington.
2010. Reference Source
- United Nations Department of Economic and Social Affairs [UN DESA]:
International Migration Report 2015.
2015. Reference Source
- UN-Habitat:
State of the World’s Cities Report 2008/9: Harmonious Cities. UN-Habitat, Nairobi. 2009. Reference Source
- Vasenev VI, Stoorvogel JJ, Vasenev II:
Urban soil organic carbon and its spatial heterogeneity in comparison with natural and agricultural areas in the Moscow region.
Catena.
2013; 107: 96–102. Publisher Full Text
- Wall DH, Bardgett RD, Kelly E:
Biodiversity in the dark.
Nature Geoscience.
2010; 3(5): 297–298. Publisher Full Text